Selected recent publications

  • T. O. Conrad, M. Genzel, N. Cvetkovic, N. Wulkow, A. Leichtle, J. Vybiral, G. Kutyniok, and C. Schütte. Sparse proteomics analysis–a compressed sensing-based approach for feature selection and classification of high-dimensional proteomics mass spectrometry data. BMC bioinformatics, 18(1):160, 2017.
  • M. Joswig, G. Loho, B. Lorenz, and R. Raber. 33rd International Symposium on Computational Geometry. MatchTheNet — an educational game on 3-dimensional polytopes. Boris Aronov and Matthew J. Katz: 66:1–66:4, 2017.
  • P. Gupta, A. Gramatke, R. Einspanier, C. Schütte, M. von Kleist, and J. Sharbati. In silico cytotoxicity assessment on cultured rat intestinal cells deduced from cellular impedance measurements. Toxicology in Vitro:e1004200, 2017.
  • F. Bernard, L. Salamanca, J. Thunberg, A. Tack, D. Jentsch, H. Lamecker, S. Zachow, F. Hertel, J. Goncalves, and P. Gemmar. Shape-aware surface reconstruction from sparse 3d point-clouds. Medical Image Analysis, 38:77–89, 2017.
  • L. Gauckler and H. Yserentant. Structure-preserving discretization of the chemical master equation. BIT Numerical Mathematics,:1-18, 2017.
  • B. Assarf, E. Gawrilow, K. Herr, M. Joswig, B. Lorenz, A. Paffenholz, and T. Rehn. Computing convex hulls and counting integer points with polymake. Mathematical Programming Computation, 9(1):1-38, 2016.
  • M. Joswig, J. Kileel, B. Sturmfels, and A. Wagner. Rigid multiview varieties. Int. J. Algebra Comput, 26:775-788, 2016.
  • M. Joswig and G. Loho. Weighted digraphs and tropical cones. Linear Algebra and its Applications, 501:304– 343, 2016.
  • R. Banisch and C. Hartmann. A sparse Markov chain approximation of LQ-type stochastic control problems. Math. Control Relat. F., 6:363–389, 2016.
  • S. Duwal, V. Sunkara, and M. von Kleist. Multiscale systems-pharmacology pipeline to assess the pro- phylactic efficacy of nrtis against hiv-1. CPT: pharmacometrics & systems pharmacology, 5:377–387, 2016.
  • S. Duwal and M. von Kleist. Top-down and bottom-up modeling in system pharmacology to understand clinical efficacy: An example with nrtis of hiv-1. European journal of pharmaceutical sciences : official journal of the European Federation for Pharmaceutical Sciences, 94:72–83, 2016.
  • I. Klebanov, A. Sikorski, C. Schütte, and S. Röblitz. Empirical Bayes methods, reference priors, cross entropy and the EM algorithm. ZIB-Report:16-56, 2016.
  • G. Sagnol, H.-C. Hege, and M. Weiser. Using sparse kernels to design computer experiments with tunable precision. Proceedings of the 22nd International Conference on Computational Statistics – COMSTAT:397–408, 2016.
  • L. Lubkoll, A. Schiela, and M. Weiser. An affine covariant composite step method for optimization with PDEs as equality constraints. Optimization Methods and Software:30, 2016.
  • M. Weiser. Inside Finite Elements. De Gruyter: 157, 2016.
  • P. Grohs, H. Hardering, and O. Sander. Optimal a priori discretization error bounds for geodesic finite elements. Foundations of Computational Mathematics, 15(6):1357–1411, 2015.
  • S. Duwal, S. Winkelmann, C. Schütte, and M. von Kleist. Optimal treatment strategies in the context of ”treatment for prevention” against hiv-1 in resource-poor settings. PLoS computational biology, 11(4): e1004200, 2015.
  • P. Deuflhard and S. Röblitz. A Guide to Numerical Modeling in Systems Biology. A Guide to Numerical Modeling in Systems Biology. Springer International Publishing, 2015.
  • M. Ehlke, M. Heyland, S. Märdian, G. Duda, and S. Zachow. Assessing the relative positioning of an osteosynthesis plate to the patient-specific femoral shape from plain 2D radiographs. 15th Annual Meeting of CAOS-International (CAOS):7p., 2015.
  • R. Zahn, S. Grotjohann, H. Ramm, S. Zachow, M. Putzier, C. Perka, and S. Tohtz. Pelvic tilt compensates for increased acetabular anteversion. Int. Orthop.:1-15, 2015.
  • S. Göschel and M. Weiser. Lossy compression for PDE-constrained optimization: Adaptive error control. Comput. Optim. Appl., 62(1):131–155, 2015.
  • N. Megow, J. Meißner, and M. Skutella. Randomization helps computing a minimum spanning tree under uncertainty. Proceedings of ESA 2015, 9294(1):878–890, 2015.
  • O. Sander and A. Schiela. Variational analysis of the coupling between a geometrically exact cosserat rod and an elastic continuum. Zeitschrift für angewandte Mathematik und Physik, 65(6):1261–1288, 2014.
  • A. Vetter, O. Sander, G. Duda, and R. Weinkamer. Healing of a mechano-responsive material. EPL (Europhysics Letters), 104(6):68005, 2014.
  • P. Grohs and G. Kutyniok. Parabolic molecules. Found. Comput. Math, 14(1):299–337, 2014.
  • A. Bujotzek, O. Schütt, A. Nielsen, K. Fakeldey, and M. Weber. Zibgridfree: Efficient conformational analysis by partition-of-unity coupling. J Math Chem, 52:781–804, 2014.
  • S. Winkelmann, C. Schütte, and M. von Kleist. "Markov Control with Rare State Observation": Sensitivity Analysis with Respect to Optimal Treatment Strategies against HIV-1. International Journal of Biomathematics and Biostatistics, 2(1), 2014.
  • M. Sarich, N. Djurdjevac, S. Bruckner, T. O. F. Conrad, and C. Schütte. Modularity revisited: A novel dynamics-based concept for decomposing complex networks. Journal of Computational Dynamics, 1(1):191– 212, 2014.
  • G. Campoli, N. Baka, B. Kaptein, E. Valstar, S. Zachow, H. Weinans, and A. Zadpoor. Relationship between the shape and density distribution of the femur and its natural frequencies of vibration. Journal of Biomechanics, 47(13):3334-3343, 2014.
  • L. Gauckler and H. Yserentant. Regularity and approximability of the solutions to the chemical master equation. ESAIM Math. Model. Numer. Anal., 48(6):1757–1775, 2014.
  • O. Sander, C. Klapproth, J. Youett, R. Kornhuber, and P. Deuflhard. Towards an efficient numerical simulation of complex 3d knee joint motion . Computing and Visualization in Science, 16(3):119–138, 2013.
  • D. Donoho and G. Kutyniok. Microlocal analysis of the geometric separation problem. Communications on Pure and Applied Mathematics, 66(1):1-47, 2013.
  • A. Leichtle, J.-M. Nuoffer, U. Ceglarek, J. Kase, T. O. F. Conrad, H. Witzigmann, J. Thiery, and G. M. Fiedler. Serum amino acid profiles and their alterations in colorectal cancer. Metabolomics, 8(4):643–653, 2012.
  • Q. Zou, A. Veeser, R. Kornhuber, and C. Gräser. Hierarchical error estimates for the energy functional in obstacle problems. Numerische Mathematik, 117(4):653–677, 2011.
  • M. Sarich, F. Noé, and C. Schütte. On the approximation quality of markov state models. Multiscale Modeling & Simulation, 8(4):1154–1177, 2010.
  • M. Sarich, F. Noé, and C. Schütte. On the approximation quality of markov state models. Multiscale Modeling & Simulation, 8(4):1154–1177, 2010.
  • P. Metzner, C. Schütte, and E. Vanden-Eijnden. Transition path theory for markov jump processes. Multi- scale Modeling & Simulation, 7(3):1192–1219, 2009.
  • G. M. Fiedler, A. Leichtle, J. Kase, S. Baumann, U. Ceglarek, K. Felix, T. O. F. Conrad, H. Witzigmann, A. Weimann, C. Schütte, J. Hauss, M. Büchler, and J. Thiery. Serum peptidome profiling revealed platelet factor 4 as a potential discriminating peptide associated with pancreatic cancer. Clinical Cancer Research, 15(11):3812–3819, 2009.
  • P. Metzner, C. Schütte, and E. Vanden-Eijnden. Transition path theory for markov jump processes. Multi- scale Modeling & Simulation, 7(3):1192–1219, 2009.